School of Biology University of St Andrews

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Downloads

Software:

• bms_runner: Prediction of functional linkage from correlated gain and loss of genes
• simpops.mac: Simulating population time series
• LVB: Reconstructing Evolution with Parsimony and Simulated Annealing
• PatQuest: Genetic marker based inference of paternity and impacts of
  paternal traits on reproductive success
  
  

Documents:

• Supplementary information (as pdf) for the following paper:
  Barker, D. 2004. LVB: Parsimony and simulated annealing in the search for phylogenetic trees. Bioinformatics, 20, 274-275